Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs1626329 chr12:121622023 C/T 3.9E-5 115 42.73 46.27 23.9 KM Plot
THYM rs1633 chr6:3267536 G/A 0 118 4.13 44.3 38.33 KM Plot
THYM rs1634 chr6:3267557 C/G 0 118 4.13 44.3 38.33 KM Plot
THYM rs1653598 chr12:121615283 T/C 2.06E-5 117 48 46.27 24.87 KM Plot
THYM rs1653601 chr12:121613695 T/C 2.06E-5 117 48 46.27 24.87 KM Plot
THYM rs1653602 chr12:121611635 A/G 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1653603 chr12:121611281 A/G 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1653605 chr12:121611055 A/C 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1653610 chr12:121606405 G/A 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1653611 chr12:121606760 A/G 2.14E-5 117 46.6 46.07 24.87 KM Plot
THYM rs1653612 chr12:121607056 C/T 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1653614 chr12:121607795 A/G 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1653616 chr12:121608556 G/A 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1653617 chr12:121608680 C/G 1.87E-5 118 46.6 46.27 24.87 KM Plot
THYM rs1653618 chr12:121608856 C/T 1.87E-5 118 46.6 46.27 24.87 KM Plot